Insertion junction: CLIP2.039339_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039339
Chromosome:chromosome 9
Location:4623413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401701 (1 of 1) IPR001104//IPR010721 - 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal // Protein of unknown function DUF1295 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTTTGTGGCACGGAGCGCTTTGCCGCTGGCGTTTCGCATGCATCGGG
Internal bar code:TGCGAACGCAACGACGGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAATTGGGGAGGAAGGG
Suggested primer 2:GTTGTGACGAGGTGCAGGTA