Insertion junction: CLIP2.039343_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039343
Chromosome:chromosome 4
Location:3178259
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g226150 AOC1 (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1; Amino acid carrier intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACACAGCAGCCGCCCCTCACCCACCGTAGCTGAGGCTCAGCGCCACCA
Internal bar code:GGTGCTGCAATCAAGCAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1264
LEAP-Seq percent confirming:40.5405
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCTCTCTCCCTCTCTC
Suggested primer 2:TTATCTGCACCACCACCACC