Insertion junction: CLIP2.039346_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039346
Chromosome:chromosome 9
Location:4992100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g405300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCAGCTGGGGTACGACATCGGCACTCTCACCTCCGTGGGCGTGCTG
Internal bar code:TTCGTTCGGAGAAGATAGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1833
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCCGTTGCCATACGTC
Suggested primer 2:ACCCCTACCCCCACTACATC