Insertion junction: CLIP2.039348_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039348
Chromosome:chromosome 9
Location:894157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403350 (1 of 1) IPR000357//IPR016024//IPR021133 - HEAT repeat // Armadillo-type fold // HEAT, type 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGCAGATGCACCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGC
Internal bar code:ATGGGCCCCTTCGGGATAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1401
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTGTGTGTACCAACGA
Suggested primer 2:GAAGACGAGGTGGTTCTGCA