Insertion junction: CLIP2.039349_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039349
Chromosome:chromosome 11
Location:1786953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467800 (1 of 1) PF06545 - Protein of unknown function (DUF1116) (DUF1116) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGACACCTGGTTATCTGACGTCTTGCGCGCGTGCACACACGGCATT
Internal bar code:TAGGGGCTTTCGGATATAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCGCCTCAACTGGGATC
Suggested primer 2:GGAGTGATGGTTGGATGCCA