Insertion junction: CLIP2.039358_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039358
Chromosome:chromosome 10
Location:1524749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428734 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCGGCAAACCGCGCCACACGTCACACGTCACACAAGTCCCCACCTGT
Internal bar code:GCTGATAAGTTATCGACAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2720
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAACAGCAACAACTG
Suggested primer 2:TGTCCACCAAGATGTCCACG