Insertion junction: CLIP2.039360_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039360
Chromosome:chromosome 16
Location:7576748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683931 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAGCACGGCCTATTGCTGGCGCCATGGTGGACCCCAAGCGGTATTT
Internal bar code:CAGGTTAACCTGGCTTTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5596
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGGTCGCCGAGAGTTTT
Suggested primer 2:GCTGCAAAGCCCCTACACTA