Insertion junction: CLIP2.039362_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039362
Chromosome:chromosome 5
Location:2262970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238052 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGGCTCCTGCGGCCTGTTGCTGCTGTTGTGGGTCTGACAGCAAGTC
Internal bar code:AGTCTCAATCCGGGGTTGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:819
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGGAACAGGAGGAGGA
Suggested primer 2:CGGCAGTAGCAGGAGAAGAG