Insertion junction: CLIP2.039367_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039367
Chromosome:chromosome 8
Location:368631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358576 (1 of 29) PF13637 - Ankyrin repeats (many copies) (Ank_4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATCCGCGCCAGCTGCCAGCAGCTTCGCCACCGCCAATGCGCTGGCG
Internal bar code:CCGTTTGAATGCCCAATTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1989
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACCACAGCCGATGGGTA
Suggested primer 2:CCGTCCCGTAGCTCTTGATC