Insertion junction: CLIP2.039369_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039369
Chromosome:chromosome 11
Location:4302528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482450 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGAAAGCCCAAGCGCAAATACACGCGAAAGAGCCTGCCTGTCAAGC
Internal bar code:AAATTCATTTGCAAATCCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGCAAACAAGTCCAACG
Suggested primer 2:CAATCAACCCTGGACGTGGA