Insertion junction: CLIP2.039374_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039374
Chromosome:chromosome 3
Location:1159451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149201 (1 of 1) PTHR10641//PTHR10641:SF655 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCAGCGCCTCGCCACCGTCCGCAGCTGCAGCTACCCTTGGTACTGG
Internal bar code:CGAACACTTTGCTTATAATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3125
LEAP-Seq percent confirming:89.0244
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCCTCTTACGCCACCCG
Suggested primer 2:ATTCGCTTCCTGGAGTGCTC