Insertion junction: CLIP2.039374_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039374
Chromosome:chromosome 3
Location:1159454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g149201 (1 of 1) PTHR10641//PTHR10641:SF655 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCGGTGGCTGCTAGATCCCGAGGCGCAGGCGCCTACAACGAATGGGT
Internal bar code:AGCCCACCGCTGTTTAACCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3881
LEAP-Seq percent confirming:73.8095
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGCTTCCTGGAGTGCTC
Suggested primer 2:GTATCCTCTTACGCCACCCG