Insertion junction: CLIP2.039381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039381
Chromosome:chromosome 11
Location:3518489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477700 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATCCACCCTTGCTTTGTCGCTTGCGCTCGGCTGCCGCAATCCCTCC
Internal bar code:CGCGATGGCACATAGAGGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCTCTCACACACACAC
Suggested primer 2:TTCACCGCCTATGTGCATGT