Insertion junction: CLIP2.039385_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039385
Chromosome:chromosome 11
Location:4164642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481375 (1 of 8) IPR000772 - Ricin B, lectin domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCCGCCGAGCCCTGAGCCACCCTCGCCGGCCCCTCCCAGTCCGGA
Internal bar code:AAAGTTAACAGTTCTGGAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAGATCCAGGCTCAG
Suggested primer 2:TCACACCATACGTTTGCCGA