Insertion junction: CLIP2.039390_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039390
Chromosome:chromosome 16
Location:5809435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680050 DRT2 DRAP1-like protein; (1 of 1) PTHR10252:SF5 - DR1-ASSOCIATED COREPRESSOR CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGCGCAGCAGAGCTTTGCCCGTCCGCCTCAGCCTTGACTGCTGCGC
Internal bar code:CGCTACGGACATCAGTAACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:34.7826
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAACCCCTGGACCTGTC
Suggested primer 2:TATGCTGCTGTACCCCCTCT