Insertion junction: CLIP2.039396_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039396
Chromosome:chromosome 2
Location:2851611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGTCAAAGACACGCGCTTTGATGAGGGCCTTTGTTGTTCAGGCTCC
Internal bar code:GTCTTTAGTATTGGCTTGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCCAACCTCTGCTTCGA
Suggested primer 2:GCACGTGCACCATGATGATC