Insertion junction: CLIP2.039397_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039397
Chromosome:chromosome 3
Location:225877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144264 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGCGATCTGCAGCGCGATGTGCAGCACCTTGGGCAGCGGCAGCAGC
Internal bar code:ACCGTTATGCGACCACGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3871
LEAP-Seq percent confirming:72.5
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTGCTGGTATGGAGG
Suggested primer 2:CACACACGAGTACACGACCA