Insertion junction: CLIP2.039403_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039403
Chromosome:chromosome 3
Location:4668667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177150 (1 of 2) K17263 - cullin-associated NEDD8-dissociated protein 1 (CAND1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGATGCTGGCGGCTCACCACAGCGCTCGTGTTCCCCGAGCGGTCCCG
Internal bar code:TGTACACCCTCAGACTCGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTACACATCTGCGGCCCTAG
Suggested primer 2:GAGCGAGGTACGGGATTGAG