Insertion junction: CLIP2.039414_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039414
Chromosome:chromosome 12
Location:5144505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526650 (1 of 8) IPR000719//IPR002290//IPR011009//IPR020635//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGACATCGCGCCTGATGGCAGCAAGGTCTTCCGCGTGTGCGACTTCAA
Internal bar code:TCCTCAGCAATAGAGTGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2541
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAATGTGCGTGCAGTCT
Suggested primer 2:TCATCAAGCAGCACGGTCTT