Insertion junction: CLIP2.039418_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039418
Chromosome:chromosome 2
Location:6446140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388500 (1 of 13) PF09273 - Rubisco LSMT substrate-binding (Rubis-subs-bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGGACTCTGCGTCGTCCTGCCTGACCTGCTGTGTGGTGTGCCCTGT
Internal bar code:GTGCGCGGTATGTTCCTCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAGGAGATTCAGACCG
Suggested primer 2:GCATATGCAGCCGTTGGAAG