Insertion junction: CLIP2.039419_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039419
Chromosome:chromosome 12
Location:3836196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514950 CGLD17,HEL53 (1 of 1) PTHR12873//PTHR12873:SF0 - T7-LIKE MITOCHONDRIAL DNA HELICASE // TWINKLE PROTEIN, MITOCHONDRIAL; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGGGGATGGGTGTCGGATGGCGGTGGGGGTAACTTTTCAACACCCA
Internal bar code:ATTGACCGCCGGGAGTGAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CATTGCTATCCACGCACAGC
Suggested primer 2:CTCCTTCGTTCGGGTTTGGA