Insertion junction: CLIP2.039419_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039419
Chromosome:chromosome 12
Location:3836197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514950 CGLD17,HEL53 (1 of 1) PTHR12873//PTHR12873:SF0 - T7-LIKE MITOCHONDRIAL DNA HELICASE // TWINKLE PROTEIN, MITOCHONDRIAL; Conserved in the Green Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGGAACCGCCCACATGCCCCCTCACCATCACCACCACCGCCCCCTG
Internal bar code:ATTGACCGCCGGGAGTGAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:509
LEAP-Seq percent confirming:21.2121
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTCGTTCGGGTTTGGA
Suggested primer 2:CATTGCTATCCACGCACAGC