Insertion junction: CLIP2.039425_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039425
Chromosome:chromosome 1
Location:2711129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016450 (1 of 1) IPR000104//IPR001214//IPR002893 - Antifreeze protein, type I // SET domain // Zinc finger, MYND-type; SET domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGTGCTGAATATTCTGGGTGGGGGTTGGGATGGCTCTGCTGTGGCG
Internal bar code:TGGTCTGTTTTGGGATAATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCACTGTAACCGCTAC
Suggested primer 2:GGGCTAGGGTCTGTAGGTGA