Insertion junction: CLIP2.039433_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039433
Chromosome:chromosome 17
Location:5646141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740100 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGCCGGTGCCAGTCATCAACGGACTGAGCTGGACGCTGGCGCACAGG
Internal bar code:GGGGTGTTGGCTATGAGACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2133
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCATCACAGGGCTGTT
Suggested primer 2:TTACTGCTGGTTGCCCTGAG