Insertion junction: CLIP2.039434_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039434
Chromosome:chromosome 7
Location:2964892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333000 CEP4 (1 of 1) 3.4.22.15 - Cathepsin L; Cysteine endopeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGTCAAAGTGGGATCCAGACATGATGTTGACGCCAATTGTGTGCAGC
Internal bar code:AAGCGCAAGGCTGGTTAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGGCCCGTGAACTTAAG
Suggested primer 2:GATTATGCGCAGGGAGCTCT