Insertion junction: CLIP2.039435_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039435
Chromosome:chromosome 12
Location:9626887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801497 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTCTTCTTGAAAGGAAAGCATGGAAACGCTAGGTACACGAGAACGGA
Internal bar code:GGGTAGTTTACTGCCGCGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCTCGGTCCAAACCTT
Suggested primer 2:CAGCGACAATCAGCGACATG