Insertion junction: CLIP2.039437_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039437
Chromosome:chromosome 12
Location:2513007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00076030

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGCGGGTGACCAGAGCTGGCACGGTTCGTGTTGGTCAGGCTGCCTT
Internal bar code:GGGTTGGTGTTGTGGTGAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2323
LEAP-Seq percent confirming:71.1111
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGTCGTTCTTGTAACCA
Suggested primer 2:CGGTCGCATTTTCTTTGGCA