Insertion junction: CLIP2.039442_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039442
Chromosome:chromosome 14
Location:3089244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628200 (1 of 1) IPR000719//IPR001245//IPR002290//IPR003018//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // GAF domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCCCACCCCCCGCCCCTCACCTCTTCCCACGCCCCTCGCTCCCATC
Internal bar code:CGTGTGTCACGAAAGGGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAGTGGTGTGGAGGATG
Suggested primer 2:TGGATGACCTTGACAGCCAC