Insertion junction: CLIP2.039449_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039449
Chromosome:chromosome 17
Location:5935979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGAGACCTCTCCCTGCTTGCGCGGCCGGCAGCGTGACGAAGCTGCAC
Internal bar code:CTGAGCTATGGTGCTTTTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTACAGCGAGCGACTCTC
Suggested primer 2:GAGGAGGGAGGGAGGGAAAT