Insertion junction: CLIP2.039450_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039450
Chromosome:chromosome 13
Location:3295854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTCGCTTGATAGGTCAACCCTTGCCTTCCGACCCTCCAACTCACCT
Internal bar code:GGTAGTCTTGAATAACGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:2.63158
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGACTGCGGGTGATCTG
Suggested primer 2:GCTGCACTTCCTCTTCCAGT