Insertion junction: CLIP2.039457_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039457
Chromosome:chromosome 3
Location:4553068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176250 ATPVD1 (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D); Vacuolar ATP synthase subunit D intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCCTTGGCTGTTGCGCCTCACCTGCACGTCGCGCTCGTGTAGCGTG
Internal bar code:GTCGTGAATTTCTCCCGGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATAGACTGCTCGAACCC
Suggested primer 2:GCCCCTATCGAGTTCTACGC