Insertion junction: CLIP2.039458_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039458
Chromosome:chromosome 14
Location:348511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610050 (1 of 1) K15180 - negative elongation factor B (COBRA1, NELFB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGCGGACGAAGCCCACGGTATTGGCGAGCGGTCTGCAGCCCGCCCG
Internal bar code:GTTACGCTGTAAAGATGAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCAGCGAGGAGGATAGC
Suggested primer 2:TGTTTTAACGCGCACAAGGG