Insertion junction: CLIP2.039461_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039461
Chromosome:chromosome 12
Location:5419440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529450 DRP5A,DRP5 (1 of 1) PTHR11566//PTHR11566:SF44 - DYNAMIN // DYNAMIN-LIKE PROTEIN C; Dynamin-type GTPase involved in plastid division intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACGGATGGCCCTCACTACACCACGGTGGAGGGTACACTCGGGGAGG
Internal bar code:CACAGATCTTCCGATGCCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTCTCTCGTGCGATAAG
Suggested primer 2:TGAAGCGGAACTGCGTATGT