Insertion junction: CLIP2.039469_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039469
Chromosome:chromosome 12
Location:1494249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487950 (1 of 2) IPR000742//IPR017853 - EGF-like domain // Glycoside hydrolase superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGCGCGCTTGCATTTCTGCCCGCACTCAAGCTCAGCAGCACACGC
Internal bar code:GGGCTACTTTCTTAAATAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3400
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGCTCGTGTGGGTAAA
Suggested primer 2:CCCTGCAAACTTGACAACGG