Insertion junction: CLIP2.039471_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039471
Chromosome:chromosome 2
Location:3850622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101200 (1 of 1) PTHR23324:SF85 - CELLULAR RETINALDEHYDE-BINDING/TRIPLE FUNCTION DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGCGGTGAGCTGAGACGCCCTCCCACTCCCCTGCCCACCCCCGAGGA
Internal bar code:CCTTGGGCACGCGGGCGCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGGACTGTCCCTTCTTG
Suggested primer 2:CCTAGACGAGACCCCTGTCA