Insertion junction: CLIP2.039472_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039472
Chromosome:chromosome 16
Location:7022400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673841 (1 of 1) PTHR13481:SF0 - UPF0454 PROTEIN C12ORF49 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACAACGCCGTCAGCATAGCAAAGCAGGCGCTGAGGTGCGCCTGGGGT
Internal bar code:AGGTTTTTTCATGATTCTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3165
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCACTTTCCCGGTAGT
Suggested primer 2:CCGAGCGCGATTCAAGAAAG