Insertion junction: CLIP2.039472_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039472
Chromosome:chromosome 16
Location:7022403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673841 (1 of 1) PTHR13481:SF0 - UPF0454 PROTEIN C12ORF49 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGGCGCCAGGCAGCACGACACGCACGACTCGTACTCCGAGCAGCAC
Internal bar code:GGACTGGTGCAGATAGTCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGCGCGATTCAAGAAAG
Suggested primer 2:CACAGCACTTTCCCGGTAGT