Insertion junction: CLIP2.039477_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039477
Chromosome:chromosome 9
Location:5276066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407200 POD1 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGGATGGTTGCCTCGTACGCCGAGCCCGATGCGATGTTGGGGAAGG
Internal bar code:CGCCCTCGCTTTACTTGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1537
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCCACGTATAACCGGG
Suggested primer 2:CCACACACGACGGGTCTAAA