Insertion junction: CLIP2.039481_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039481
Chromosome:chromosome 12
Location:6505133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537700 (1 of 1) IPR023238 - FAM175 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGCCTGGCGCCGGTCTCAATGCGCTACGTTTGGCCTCGTGTGCTGC
Internal bar code:GCGAGTAGCAGTGGAGTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGCAGAGTAACCCCCA
Suggested primer 2:TGGCGAAACAACGGTATGGA