Insertion junction: CLIP2.039487_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039487
Chromosome:chromosome 2
Location:6554404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389200 UMM8 UbiE/COQ5 methyltransferase family protein; (1 of 1) 2.1.1.288 - Aklanonic acid methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAACATCGCACCTTGAAGGTGTTCATGACCAGGCGGCCGTTGGGGCG
Internal bar code:TCCTTATTGTAATGTGAACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:29.1667
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTGGACTGCGTACATT
Suggested primer 2:GCCAGCACCTCCATACTCTC