Insertion junction: CLIP2.039488_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039488
Chromosome:chromosome 10
Location:1476361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428500 PHX14,P4H2,PFH2 (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2); Prolyl 4-hydroxylase 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCGCAGTCCTCGCACACGCCGCACGACAGCCGGCACGACCCCACCT
Internal bar code:AGTCAGCAACCCTATATTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1109
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGCGGTCATCTAGCAG
Suggested primer 2:CAAGACACCACAACAAGGCG