Insertion junction: CLIP2.039489_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039489
Chromosome:chromosome 2
Location:842624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078831 (1 of 1) IPR002059//IPR012340 - Cold-shock protein, DNA-binding // Nucleic acid-binding, OB-fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCCTGTTTCCGGAGCTGGCTCCAAAGTTGGCCCCAGGGGCGCGGCTC
Internal bar code:GTAGCAGCCGCAGCCACGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3588
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTAAACGGGGAGGCTA
Suggested primer 2:GATGCTGCTGCTGTTACTGC