Insertion junction: CLIP2.039490_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039490
Chromosome:chromosome 3
Location:6693317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195600 (1 of 1) 3.2.1.28 - Alpha,alpha-trehalase / Trehalase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGAACGAAATGGCTTGGATGCCAAAGCCACTTTTGTGTTGTATGTCA
Internal bar code:TGTATCCGGGGGAGGGGGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3303
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCAACAACCACAGCAG
Suggested primer 2:GCCGTAAGCACGTAAGCATG