Insertion junction: CLIP2.039494_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039494
Chromosome:chromosome 3
Location:2770156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161578 (1 of 6) IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTTGTTCTCAGCATGACTGAGCGGACCGCTAACTAGCATGTACTGCC
Internal bar code:TATCATTGCATAATTTGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4601
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACAACAGACAGGCAAG
Suggested primer 2:CTCAAAGCCTCCGCCTAACA