Insertion junction: CLIP2.039494_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039494
Chromosome:chromosome 3
Location:2770179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161578 (1 of 6) IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTCGAATAGTCACGCTGGTTGGCTGATGAGCAGCTGGGATGTGGGCG
Internal bar code:TTTGGTATTCGAGAAGTAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5312
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAGCCTCCGCCTAACA
Suggested primer 2:GGCAACAACAGACAGGCAAG