Insertion junction: CLIP2.039507_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039507
Chromosome:chromosome 1
Location:8051689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g060712 (1 of 1) IPR002867//IPR031127 - IBR domain // E3 ubiquitin ligase RBR family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACTTGGCGGGGACGCGGCCGTGATACACCGTATCCGGGAGCCGGGGG
Internal bar code:CTTGGGGCCTACGCGCGATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCATGCTCAAACCTTCGC
Suggested primer 2:ACTGAAGTCACCAAGTGGCG