Insertion junction: CLIP2.039507_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039507
Chromosome:chromosome 1
Location:8051691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g060712 (1 of 1) IPR002867//IPR031127 - IBR domain // E3 ubiquitin ligase RBR family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGTCTGCTCGCACACAACCCCCCTACACCTCAGGCGCTCCAACCAG
Internal bar code:CTAGAAGCACGGGAAGAAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1636
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGAAGTCACCAAGTGGCG
Suggested primer 2:CGTCATGCTCAAACCTTCGC