Insertion junction: CLIP2.039508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039508
Chromosome:chromosome 9
Location:2202404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395300 (1 of 1) PTHR11736//PTHR11736:SF14 - MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN // MAGE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCGCGCCAGCACCCGGACGGGGCGCGCTCCATCCTCGGCACGCGCG
Internal bar code:GTTGGTTGGCCTTTCTCTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:828
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCCAGCCATCAAGTCT
Suggested primer 2:AGTAGCCGCAGTGTAAGTCG