Insertion junction: CLIP2.039509_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039509
Chromosome:chromosome 6
Location:2366886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268150 CNK3 NimA-related protein kinase; (1 of 4) PTHR24361//PTHR24361:SF411 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGACTCGATTAGGCCGCGCAGGGGGGTGGAGTACCGGGTCGGCACCG
Internal bar code:ACGATGTTGTATGCGTGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1660
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTGCTTCGCATCTTGC
Suggested primer 2:TGTTAAACACGCTGCAACGG