Insertion junction: CLIP2.039516_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039516
Chromosome:chromosome 3
Location:7379694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206351 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAACCCGGCCTCGCACGCCGTCGCGGCAGCGGCCGCACTAAAGCCA
Internal bar code:ACATAATTATGGGCGGACCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:950
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCAACTGGGCATGGAG
Suggested primer 2:GCTGCCAGTGACTCATGACT